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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902667.1_cds_XP_016452699.1_46908
CDS Infomation

[gene=LOC107777230] [db_xref=GeneID:107777230] [protein=probable xyloglucan glycosyltransferase 12] [protein_id=XP_016452699.1] [location=complement(join(20198..20830,20929..21042,21145..21435,21609..21917,22136..22858))] [gbkey=CDS]
Sequence

ATGGCACAATCCTTTAGCTGGTGGGGTAAAGAAATTCAAAGGGGTACCCCTGTGGTGGTG
AAAATGGAGAACCCAAATAACTGGTCCATGGTTGAGTTACAAAGTCCATCAGATGATGAT
TTTCTGTTAACAAAAGGTGAAAAGGTGAAAAACAAGAATGCAAAGCAGCTCACATGGGTT
CTTCTTCTCAAGGCACACAAAGCAGCAGGTTGCTTAACTTCAATTGCCTCTGCTTTGTTC
AGTCTTGGCTCTGTTATCCACCGCCGTATTGCCACCGGAAGGACAGATTCTTCCACCGTT
AATAGCCGGTTTTATATTTGTATAAAGGTCTTCCTTTGGTTATCTTTAATCTTGTTAGGT
TTTGAAATAGCTGCATATTATAAAGGTTGGCACTTTAGTGCTTCAGAGTTTCAAATTCAG
GGTTTATACACATTGGCTAATCCATTAGCTGTGAAGGGTGTGTTTGATTCTCTTTATTCC
ATGTGGGTTTTAATTAGGGTGGAGTATCTTGCTCCCCCTCTTCAATTATTAGCCAATGTG
TGCATTGTCCTCTTTCTTATCCAGAGTTTGGATAGGTTAATCTTGTGTTTGGGTTGTTTC
TGGATCAAGATAAAGAATATTAGGCCAGTTTTGAAAGAGGGTCCAGTGGATCTTGAGGCT
GGTAATGGTGGTGGTTACTATCCCATGGTTCTTGTTCAAATCCCCATGTGTAATGAAAAA
GAGGTTTATCAGCAATCCATTGCAGCTGTGTGCAGTTTGGAGTGGCCTAAATCCAAACTG
TTGATTCAAATTCTTGATGATTCTGACGATTCCATGACTCAGACGTTGATCAAAGAGGAG
GTGCATAAATGGCAGAAGGATGGTGCAAACATTGTATATCGTCATAGGGTGATTAGAGAA
GGTTACAAAGCTGGCAATCTTAAGTCAGCCATGAATTGCAGCTATGTCAAAGACTATGAA
TTTGTTACCATTTTCGATGCAGATTTTCAGCCATCACCTGATTTTCTTAAGAGAACTGTT
CCTTATTTTAAGGATAATGAGGACCTAGGGTTGGTTCAAGCAAGGTGGTCCTTTGTGAAC
AAGGAGGAAAATCTTCTAACAAGACTGCAGCTTATTAATTTGGCCTTTCATTTTGAAGTG
GAACAACAGGTGAATGGGATTTTTCTAAATTTCTTTGGATTTAACGGTACTGCTGGAGTA
TGGAGGATTAAGGCATTAGAAGGTTCTGGTGGTTGGTTGGAGAGGACAACAGTTGAGGAT
ATGGACATTGCTGTTCGGGCACATCTCCACGGGTGGAAATTCATCTTTCTCAATGATGTA
GAGTGCCACTGTGAATTACCAGAATCATATGAAGCATATCGGAAGCAACAACATAGATGG
CATTCGGGGCCAATGCAGTTATTCCGTCTTTGTTTGCCTGCCATCATTGAATCAAATATA
AGCATTTGGAAGAAGGGAAACTTGATATTTCTTTTCTTCCTTCTAAGGAAGCTGATACTG
CCATTTTATTCTTTCACCTTATTTTGTATAATCCTCCCCATGACCATGTTCATTCCCGAG
GCTACACTCCCGACATGGGTTGTCTGTTACATTCCTGCCACCATGTCGTTTCTCAATATA
CTTCCAGCCCCTAAATCTTTCCCTTTCGTTGTGCCATACCTTCTCTTCGAAAACACTATG
TCCGTGACCAAGTTCAATGCCATGATCTCAGGGCTTTTCCAGCTTGGAAGCGCGTACGAA
TGGGTTGTAACCAAGAAATCAGGACGTTCTTCCGAGGGTGACCTTTCCTTGTTGGTTGAG
GAAAAACCAAAACATCAAAGAGGTATTTCGGAGCCTAATTTGGGGGACTTGAAGGAGGAA
ATCAAGAAGAAAGAACGCAAGTCCTCGAGGAAGAAGAAGAAGAAGCACAACAGAATATAC
ACAAAAGAATTGGCCTTGGCTTTCTTGCTGTTGACAGCTTCAGTGAGGAGCCTCCTATCA
GCTCAAGGAATCCACTTTTACTTCTTGTTGTTTCAAGGGATATCATTCCTGCTTGTCGGG
CTAGACTTGATCGGTGAACAGGTTGACTAG

Peptide Sequence

PEP ID

XP_016452699.1
PEP Infomation

PREDICTED: probable xyloglucan glycosyltransferase 12 [Nicotiana tabacum]
Sequence

MAQSFSWWGKEIQRGTPVVVKMENPNNWSMVELQSPSDDDFLLTKGEKVKNKNAKQLTWV
LLLKAHKAAGCLTSIASALFSLGSVIHRRIATGRTDSSTVNSRFYICIKVFLWLSLILLG
FEIAAYYKGWHFSASEFQIQGLYTLANPLAVKGVFDSLYSMWVLIRVEYLAPPLQLLANV
CIVLFLIQSLDRLILCLGCFWIKIKNIRPVLKEGPVDLEAGNGGGYYPMVLVQIPMCNEK
EVYQQSIAAVCSLEWPKSKLLIQILDDSDDSMTQTLIKEEVHKWQKDGANIVYRHRVIRE
GYKAGNLKSAMNCSYVKDYEFVTIFDADFQPSPDFLKRTVPYFKDNEDLGLVQARWSFVN
KEENLLTRLQLINLAFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEGSGGWLERTTVED
MDIAVRAHLHGWKFIFLNDVECHCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIESNI
SIWKKGNLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEATLPTWVVCYIPATMSFLNI
LPAPKSFPFVVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLSLLVE
EKPKHQRGISEPNLGDLKEEIKKKERKSSRKKKKKHNRIYTKELALAFLLLTASVRSLLS
AQGIHFYFLLFQGISFLLVGLDLIGEQVD

Transcript Sequence

Gene sequence data has not been registered.